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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918498.1_cds_XP_016467934.1_60630
CDS Infomation

[gene=LOC107790515] [db_xref=GeneID:107790515] [protein=double-strand break repair protein MRE11-like isoform X4] [protein_id=XP_016467934.1] [location=join(11864..11880,12128..12263,12473..12630,13069..13159,14216..14335,14412..14480,14564..14655,14797..14899,14997..15104,15192..15254,15366..15437,15581..15658,15763..15825,15944..16004,16941..17023,17560..17673,17798..17875,19235..19306,19414..19691,19798..19948)] [gbkey=CDS]
Sequence

ATGGACGATTCTTCAAGGGAAGAGGAGATCGACACGGTTAAGATCCTGGTTGCTACAGAC
TGTCACTTAGGCTATATGGAGAAGGATGAAGTACGTAGGCATGATTCATTTCAGGCATTT
GAAGAGATATGTTCGATTGCGGAGAAAAAACAGGTGGACTTTGTGCTTCTCGGTGGTGAT
CTATTTCACGAGAATAAGCCTTCCAGGTCAACACTGGTGAAAGCCATTGAGATTCTCCGT
CGTTATTGTCTCAATGATCGACCTGTGCAATTCCAAGTTGTTAGTGACCAGACAGTGAAC
TTTGCTAACATGTTTGGTCATGTAAATTATGAAGATCCTCACTTTAATGTGGGGTTGCCT
GTTTTTAGCATTCATGGCAATCATGATGATCCAGCTGGTGTGGATAACCTATCTGCCGTT
GATATCCTTTCCGCATGCAATCTTGTTAACTATTTTGGTAAAATGGATCTTGGTGGTTCT
GGTGTTGGGCAGATTGCTCTCTACCCTATCCTTATCAGGAAGGGTTCAACATCAGTAGCT
CTTTATGGTCTAGGGAATATCAGGGACGAACGCTTGAATAGAATGTTTCAGACACCACAT
GCTGTGCAATGGATGCGACCTGAGGCTCAGGAAAGGTGTCAAGTCTCGGACTGGTTCAAC
ATTTTGGTACTTCACCAAAACAGAGTAAAGACAAATCCGAAAAATGCAATAAATGAGCAT
TTCCTGCCTCGCTTTCTTGATTTTATTGTGTGGGGTCATGAACATGAATGTTTAGTGGAC
CCTCAGGAGGTCCCAGGTATGGGTTTTCACATTACTCAGCCAGGTTCTTCTGTTGCAACA
TCACTGATTGAGGGTGAATCAAAACAAAAACATGTACTCCTCTTAGAGATTAAGGGAAAT
CAATATCGCCCAACAAAGATACCTCTGAACTCAGTGCGGCCTTTTGAATATACTGAGGTA
GTGCTGAAGGATGAACCTGATATTGATCCTAATGATCATAGCTCGATTCTTGAACATTTG
GATAGCGTAGTCAGGAAGTTGATAGAAAGATCTAATCAAAAGGCTAATACTGAATCTGTT
GTAAAGCTCCCCTTAGTTCGAGTAAAGGTAGACTACTCTGGGTTTATGACTATAAATCCT
CAAAGGTTTGGACAAAAATATGTGGGGAAGGTTGCCAATCCGCAGGATATTCTCATTTTC
TCAAAATCATCAAAGAAGGCCGGCAAGGAAGCTAAATTTGATGATTCTGAGCGGCTTCGC
CCTGAAGAATTGAATCAGCAAAACATTGAAGCTTTAGTTGCTGAGAGCAATTTGAAAATG
GAGGTACTTCCAGTCAGCGATCTGGATGTTGCGCTGCACAATTTTGTTAACAAGGACGAC
AAAATGGCTTTTTATTCTTGTGTACAATACAACCTTGAGGAAACTCGAAATAAAATAGCT
CGTGATTCAGATGCAGTGAAATTCGAAGAAGATGATATAATTTTAAAAGTTGGAGAATGC
TTAGAGGAACGTGTCAAACAAAGAGCTACACAGAATAAAGATGATCAACCTTTCTCCTTT
AATGGACAGTCCTTGGAGGACACACGTTCTCAGGATATCAGAGGCAAAAGTACTGCAGTA
GGATCAGCAGTTTCATTCAGTGATGATGAGGACACCACTATGCTCTCCGCCTCAAAGTCT
ACTGCCGGTAAAGGAAGAAAGGAGTCATCTCAATCTTTTAGATCCTCTCGTGATGCTTCT
GAAGTTAGCAAGACCTCTTCAAGGGGAAGGGGCAGAGGCAGAGGCAGAGGAAGGGCTTCC
AATAGCTTGAAGCAGACAACTCTTGACGCATCTTTGGGATTCCGTCATTCACAGAGAAAC
TTTTGCTTCGAGTTGTGCTTGTTTCTTGCTTTCTTTGGCATCGAAGGGTTTTATATGTGG
CTTGTTGCTGTTGTAAGAATTGAGCATCAAGGGAAGTTTCATTATGTTTCTGAACTCCAA
GCTACATTTAGCTTGCTAAGAATATAA

Peptide Sequence

PEP ID

XP_016467934.1
PEP Infomation

PREDICTED: double-strand break repair protein MRE11-like isoform X4 [Nicotiana tabacum]
Sequence

MDDSSREEEIDTVKILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEKKQVDFVLLGGD
LFHENKPSRSTLVKAIEILRRYCLNDRPVQFQVVSDQTVNFANMFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQIALYPILIRKGSTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAQERCQVSDWFNILVLHQNRVKTNPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIEGESKQKHVLLLEIKGN
QYRPTKIPLNSVRPFEYTEVVLKDEPDIDPNDHSSILEHLDSVVRKLIERSNQKANTESV
VKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSKKAGKEAKFDDSERLR
PEELNQQNIEALVAESNLKMEVLPVSDLDVALHNFVNKDDKMAFYSCVQYNLEETRNKIA
RDSDAVKFEEDDIILKVGECLEERVKQRATQNKDDQPFSFNGQSLEDTRSQDIRGKSTAV
GSAVSFSDDEDTTMLSASKSTAGKGRKESSQSFRSSRDASEVSKTSSRGRGRGRGRGRAS
NSLKQTTLDASLGFRHSQRNFCFELCLFLAFFGIEGFYMWLVAVVRIEHQGKFHYVSELQ
ATFSLLRI

Transcript Sequence

Gene sequence data has not been registered.